STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim35-28Tripartite motif-containing 35-28. (477 aa)    
Predicted Functional Partners:
dnlz
DNL-type zinc finger protein; May function as a co-chaperone towards HSPA9/mortalin which, by itself, is prone to self-aggregation.
      
 0.870
ch25hl2
Cholesterol 25-hydroxylase-like protein 2; May catalyze the formation of 25-hydroxycholesterol from cholesterol.
      
 0.723
ch25hl1.2
Cholesterol 25-hydroxylase-like protein 1, member 2; May catalyze the formation of 25-hydroxycholesterol from cholesterol.
      
 0.723
ch25hl1.1
Cholesterol 25-hydroxylase-like protein 1, member 1; May catalyze the formation of 25-hydroxycholesterol from cholesterol.
      
 0.719
ch25hl3
Cholesterol 25-hydroxylase-like 3; Belongs to the sterol desaturase family.
      
 0.647
ftr06-2
FinTRIM family, member 6.
      
 0.625
ftr52p
FinTRIM family, member 52, pseudogene.
    
 
 0.614
rps27a
Ribosomal protein S27a.
    
  0.611
UBB
Si:ch211-202a12.4.
    
  0.576
ubc
Ubiquitin C.
    
  0.576
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.