Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
acsm3Acyl-CoA synthetase medium chain family member 3. (591 aa)    
Predicted Functional Partners:
acads
Acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain.
  
 
 0.958
lipt1
Lipoyltransferase 1.
    
 0.938
acadsb
Acyl-CoA dehydrogenase short/branched chain.
  
 
 0.858
LOC100037342
Uncharacterized protein.
  
 
 0.838
acadl
Acyl-CoA dehydrogenase long chain.
  
 
 0.837
scp2a
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.801
scp2b
Sterol carrier protein 2b.
  
 
 0.801
cryl1
Crystallin, lambda 1.
  
 
 0.784
cs
Citrate synthase, mitochondrial.
  
 0.761
hsdl2
Hydroxysteroid dehydrogenase-like protein 2; Has apparently no steroid dehydrogenase activity. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.760
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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