STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan2aTetraspanin. (211 aa)    
Predicted Functional Partners:
nudt8
Nudix (nucleoside diphosphate-linked moiety X)-type motif 8.
      
 0.749
pdxp
Pyridoxal (pyridoxine, vitamin B6) phosphatase; Belongs to the HAD-like hydrolase superfamily.
   
  
 0.689
fam174b
Membrane protein FAM174B; Essential for Golgi structural integrity. Belongs to the FAM174 family.
   
  
 0.649
dhrs12
Dehydrogenase/reductase (SDR family) member 12.
    
 
 0.647
epb41l3a
Erythrocyte membrane protein band 4.1-like 3a.
      
 0.645
dennd2db
DENN/MADD domain-containing 2Db.
      
 0.582
ninj2
Ninjurin 2.
   
  
 0.580
LOC799194
Tetraspanin.
      
 0.562
dram2b
DNA-damage-regulated autophagy modulator 2b.
      
 0.540
lgi3
Leucine-rich repeat LGI family, member 3.
   
  
 0.517
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.