Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SH3RF3 | asmt2 | ENSDARP00000131264 | ENSDARP00000081319 | Si:ch211-124n19.2. | Acetylserotonin O-methyltransferase 2. | 0.717 |
SH3RF3 | jade1 | ENSDARP00000131264 | ENSDARP00000042059 | Si:ch211-124n19.2. | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | 0.585 |
SH3RF3 | larp1b | ENSDARP00000131264 | ENSDARP00000007794 | Si:ch211-124n19.2. | La ribonucleoprotein 1B. | 0.710 |
asmt2 | SH3RF3 | ENSDARP00000081319 | ENSDARP00000131264 | Acetylserotonin O-methyltransferase 2. | Si:ch211-124n19.2. | 0.717 |
asmt2 | jade1 | ENSDARP00000081319 | ENSDARP00000042059 | Acetylserotonin O-methyltransferase 2. | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | 0.637 |
asmt2 | larp1b | ENSDARP00000081319 | ENSDARP00000007794 | Acetylserotonin O-methyltransferase 2. | La ribonucleoprotein 1B. | 0.761 |
asmt2 | pacc1 | ENSDARP00000081319 | ENSDARP00000129197 | Acetylserotonin O-methyltransferase 2. | Proton-activated chloride channel; Proton-activated chloride channel that mediates import of chloride ion in response to extracellular acidic pH. Displays channel activity with distinct kinetic properties compared to the human ortholog channel. | 0.541 |
ing4 | ing5a | ENSDARP00000045244 | ENSDARP00000040700 | Inhibitor of growth protein. | Inhibitor of growth protein. | 0.714 |
ing4 | jade1 | ENSDARP00000045244 | ENSDARP00000042059 | Inhibitor of growth protein. | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | 0.913 |
ing4 | kat7a | ENSDARP00000045244 | ENSDARP00000078309 | Inhibitor of growth protein. | K(lysine) acetyltransferase 7a. | 0.662 |
ing4 | meaf6 | ENSDARP00000045244 | ENSDARP00000132726 | Inhibitor of growth protein. | Chromatin modification-related protein MEAF6; Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histone H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. Component of the HBO1 complex which has a histone H4- specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vi [...] | 0.894 |
ing5a | ing4 | ENSDARP00000040700 | ENSDARP00000045244 | Inhibitor of growth protein. | Inhibitor of growth protein. | 0.714 |
ing5a | jade1 | ENSDARP00000040700 | ENSDARP00000042059 | Inhibitor of growth protein. | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | 0.774 |
ing5a | kat7a | ENSDARP00000040700 | ENSDARP00000078309 | Inhibitor of growth protein. | K(lysine) acetyltransferase 7a. | 0.662 |
ing5a | meaf6 | ENSDARP00000040700 | ENSDARP00000132726 | Inhibitor of growth protein. | Chromatin modification-related protein MEAF6; Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histone H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. Component of the HBO1 complex which has a histone H4- specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vi [...] | 0.951 |
jade1 | SH3RF3 | ENSDARP00000042059 | ENSDARP00000131264 | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | Si:ch211-124n19.2. | 0.585 |
jade1 | asmt2 | ENSDARP00000042059 | ENSDARP00000081319 | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | Acetylserotonin O-methyltransferase 2. | 0.637 |
jade1 | ing4 | ENSDARP00000042059 | ENSDARP00000045244 | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | Inhibitor of growth protein. | 0.913 |
jade1 | ing5a | ENSDARP00000042059 | ENSDARP00000040700 | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | Inhibitor of growth protein. | 0.774 |
jade1 | kat7a | ENSDARP00000042059 | ENSDARP00000078309 | Protein Jade-1; Transcriptional coactivator which seems to act by promoting acetylation of nucleosomal histone H4 by kat5. Promotes apoptosis (By similarity). | K(lysine) acetyltransferase 7a. | 0.630 |
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