Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dtnaDystrobrevin. (710 aa)    
Predicted Functional Partners:
sntb2
Syntrophin, beta 2.
   
 0.932
SNTA1
Syntrophin alpha 1.
   
 0.929
sntb1
Syntrophin, basic 1.
   
 0.911
LOC103909931
Uncharacterized protein.
 
  
 0.897
fam136a
Protein FAM136A; Belongs to the FAM136 family.
      
 0.895
sntg2
Syntrophin, gamma 2.
    
 
 0.847
dytn
Dystrotelin.
    
0.843
sntg1
Syntrophin, gamma 1.
    
 
 0.825
dmd
Dystrophin.
   
0.818
drp2
Dystrophin-related protein 2.
   
0.810
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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