Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
zfyve21Zinc finger, FYVE domain-containing 21. (226 aa)    
Predicted Functional Partners:
F1QFG5_DANRE
Si:dkey-177p2.6.
      
 0.772
ect2l
Coiled-coil domain-containing 28A.
      
 0.772
pinx1
PIN2 (TERF1)-interacting telomerase inhibitor 1.
      
 0.737
ciao2b
Cytosolic iron-sulfur assembly component 2B.
      
 0.720
ndufb2
NADH:ubiquinone oxidoreductase subunit B2.
      
 0.720
xrcc3
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily.
   
  
 0.714
inf2
GBD/FH3 domain-containing protein.
      
 0.700
wdr3
WD repeat domain 3.
      
 0.698
bag5
BCL2-associated athanogene 5.
      
 0.697
znf593
Zinc finger protein 593.
      
 0.685
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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