Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cadpsbCa2+-dependent activator protein for secretion b. (1329 aa)    
Predicted Functional Partners:
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
      
 0.897
mgrn1b
Mahogunin, ring finger 1b.
      
 0.882
kctd2
Potassium channel tetramerization domain-containing 2.
      
 0.837
pcdh1b
Protocadherin 1b.
      
 0.748
lrrtm1
Leucine-rich repeat transmembrane neuronal 1.
   
  
 0.743
pcdh17
Protocadherin-17.
   
  
 0.731
grm2b
Glutamate receptor, metabotropic 2b.
   
  
 0.723
cadm1b
Cell adhesion molecule 1b.
   
  
 0.693
coq6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
      
 0.533
slc7a6
Y+L amino acid transporter 2; Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
      
 0.504
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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