STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
reep2Receptor expression-enhancing protein 2; May enhance the cell surface expression of odorant receptors. (268 aa)    
Predicted Functional Partners:
atl1
Atlastin GTPase 1.
    
 
 0.876
arl6ip1
ADP-ribosylation factor-like 6-interacting protein 1.
    
 
 0.853
spast
Spastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Go [...]
   
  
 0.781
rab3gap2
RAB3 GTPase-activating protein subunit 2 (non-catalytic).
   
 
 0.764
tfg
Trafficking from ER to golgi regulator.
    
 
 0.755
rtn2a
Reticulon.
   
 
 0.726
zfyve27
Zinc finger, FYVE domain-containing 27.
    
 
 0.714
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.692
bscl2
BSCL2 lipid droplet biogenesis-associated, seipin.
      
 0.688
erlin2-2
Erlin-2.
      
 0.670
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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