STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsnaxip1Translin-associated factor X-interacting protein 1. (673 aa)    
Predicted Functional Partners:
cfap74
Calcium channel, voltage-dependent, L type, alpha 1D subunit, b.
    
 
 0.882
ccdc146
Coiled-coil domain-containing 146.
   
 
 0.875
rsph14
Radial spoke head 14 homolog.
   
  
 0.872
zswim2
Zinc finger, SWIM-type-containing 2.
   
  
 0.865
rsph10b
Radial spoke head 10 homolog B.
   
 
 0.846
adad1
Adenosine deaminase domain-containing 1 (testis-specific).
   
 
 0.843
dlec1
DLEC1 cilia and flagella-associated protein.
   
 
 0.833
saxo2
Stabilizer of axonemal microtubules 2.
   
 
 0.827
lrrc34
Leucine-rich repeat-containing 34.
   
  
 0.817
lrrc23
Leucine-rich repeat-containing 23.
   
 
 0.789
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.