STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trappc6blTrafficking protein particle complex 6b-like. (161 aa)    
Predicted Functional Partners:
trappc2l
Trafficking protein particle complex 2-like.
   
 0.976
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.971
trappc2
Trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.971
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.969
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
   
 0.969
trappc8
Trafficking protein particle complex 8.
   
 0.969
trappc5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.968
trappc10
Trafficking protein particle complex 10.
    
 0.955
tcta
T-cell leukemia translocation-altered gene protein homolog.
      
 0.950
gpr25
G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.
      
 0.944
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.