STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hs1bp3HCLS1-binding protein 3. (349 aa)    
Predicted Functional Partners:
ENSDARP00000149432
PX domain-containing protein.
      
 0.934
pxk
PX domain-containing serine/threonine kinase.
      
 0.806
snx21
Sorting nexin family member 21.
      
 0.742
sh3pxd2b
SH3 and PX domains 2B.
      
 0.691
tor2a
Torsin.
   
  
 0.677
snx29
Sorting nexin 29.
      
 0.669
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
      
 0.668
tbc1d14
TBC1 domain family, member 14.
      
 0.664
pld2
Phospholipase.
      
 0.663
arhgap33
Rho GTPase-activating protein 33.
      
 0.661
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.