Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
dnajc9DnaJ (Hsp40) homolog, subfamily C, member 9. (252 aa)    
Predicted Functional Partners:
mcm2
DNA helicase; Belongs to the MCM family.
   
 
 0.870
dnajc28
DnaJ (Hsp40) homolog, subfamily C, member 28.
      
 0.790
nudcd1
NudC domain-containing protein 1.
    
   0.790
dnajc27
DnaJ homolog subfamily C member 27; GTPase possibly involved in regulation of the MEK/ERK pathway; Belongs to the small GTPase superfamily. Rab family.
    
 
 0.789
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
   
  
 0.755
HTRA3
HtrA serine peptidase 3.
  
 
 0.751
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1.
   
0.744
dnajc25
DnaJ (Hsp40) homolog, subfamily C, member 25.
      
0.728
dnajc24
DnaJ (Hsp40) homolog, subfamily C, member 24.
   
  
 0.727
ttyh2l
Protein tweety homolog 2-like; Probable large-conductance Ca(2+)-activated chloride channel. Belongs to the tweety family.
      
 0.720
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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