Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
itgavIntegrin, alpha V; Belongs to the integrin alpha chain family. (1045 aa)    
Predicted Functional Partners:
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.998
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.998
itgb3a
Integrin beta; Belongs to the integrin beta chain family.
   
 0.997
itgb3b
Integrin beta; Belongs to the integrin beta chain family.
   
 0.997
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.997
vtnb
Vitronectin b.
   
 0.991
itgb4
Integrin beta.
    
 0.984
itgb2
Integrin beta.
   
 0.981
itgb7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.980
itgb1b
Integrin beta; Belongs to the integrin beta chain family.
    
 0.980
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.