STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
camk2d2Calcium/calmodulin-dependent protein kinase type II delta 2 chain; CaM-kinase II (CAMK2) is a prominent kinase in the central nervous system. (554 aa)    
Predicted Functional Partners:
caskb
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
 
  
 
 0.718
lrrc7
Leucine-rich repeat-containing 7.
   
 0.649
camk2a
Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
  
 
0.648
grin2aa
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a.
   
 0.645
grin2cb
Uncharacterized protein.
   
 0.645
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
 
  
 
 0.645
grin1a
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.633
grin2bb
Glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b.
   
 0.628
calm2b
Calmodulin; Belongs to the calmodulin family.
   
 
 0.587
LOC100149482
Glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
   
 0.574
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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