STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnd1aRas-like protein Rnd1b. (232 aa)    
Predicted Functional Partners:
plxnb1b
Plexin b1b.
    
 
 0.851
itsn2a
Intersectin 2a.
    
 
 0.791
itsn2b
Intersectin 2b.
    
 
 0.791
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.761
flrt3
Fibronectin leucine-rich transmembrane 3.
   
 
 0.706
farp2
FERM, RhoGEF and pleckstrin domain protein 2.
    
 
 0.650
arl15b
ADP-ribosylation factor-like 15b.
   
 
 0.614
nostrin
Nitric oxide synthase-trafficking.
   
 
 0.592
arl15a
ADP-ribosylation factor-like 15a.
   
 
 0.592
sema4d
Uncharacterized protein; Belongs to the semaphorin family.
    
 
 0.583
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.