Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
rnd1aRas-like protein Rnd1b. (232 aa)    
Predicted Functional Partners:
plxnb1b
Plexin b1b.
    
 0.802
farp2
FERM, RhoGEF and pleckstrin domain protein 2.
     
 0.746
arhgdig
Rho GDP dissociation inhibitor (GDI) gamma.
    
 0.683
arhgdia
Rho GDP dissociation inhibitor (GDI) alpha.
    
 0.683
ect2
Epithelial cell-transforming 2.
    
 
 0.676
arl15b
ADP-ribosylation factor-like 15b.
   
 0.640
MRAS
Si:ch73-116o1.2.
    
 0.619
mras
Muscle RAS oncogene homolog.
    
 0.619
arhgap36
Rho GTPase-activating protein 36.
    
 0.616
arhgef3
Rho guanine nucleotide exchange factor (GEF) 3.
    
 0.615
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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