STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlf2Myeloid leukemia factor 2. (250 aa)    
Predicted Functional Partners:
arfgap2
ADP-ribosylation factor GTPase-activating protein 2.
      
 0.923
crocc2
Ciliary rootlet coiled-coil, rootletin family member 2.
      
 0.876
ddah2
Dimethylarginine dimethylaminohydrolase 2.
   
  
 0.864
scgn
Secretagogin.
    
 
 0.795
arfgap3
ADP-ribosylation factor GTPase-activating protein 3.
      
 0.756
doc2a
Double C2-like domains, alpha.
      
 0.700
styk1b
Serine/threonine/tyrosine kinase 1b.
      
 0.682
foxj2
Forkhead box J2.
    
 
 0.584
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
      
 0.584
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
  
 0.579
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.