Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mlf2Myeloid leukemia factor 2. (250 aa)    
Predicted Functional Partners:
stub1
STIP1 homology and U-Box-containing protein 1.
   
   0.904
arfgap2
ADP-ribosylation factor GTPase-activating protein 2.
      
 0.838
dnajb6a
DnaJ heat shock protein family (Hsp40) member B6a.
   
 
 0.830
dnajb6b
DnaJ heat shock protein family (Hsp40) member B6b.
   
 
 0.811
dnajb2
DnaJ heat shock protein family (Hsp40) member B2.
   
 
 0.809
ddah2
Dimethylarginine dimethylaminohydrolase 2.
   
  
 0.806
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7.
   
 
 0.799
edf1
Endothelial differentiation-related factor 1 homolog; Probable transcriptional coactivator.
   
  
 0.768
crocc2
Ciliary rootlet coiled-coil, rootletin family member 2.
      
 0.746
bag3
BCL2-associated athanogene 3.
    
 
 0.742
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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