Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tcp11l1T-complex 11, testis-specific-like 1. (502 aa)    
Predicted Functional Partners:
ttc5
Tetratricopeptide repeat domain 5.
    
   0.515
CHST8
Carbohydrate sulfotransferase.
      
 0.464
usp37
Ubiquitin carboxyl-terminal hydrolase 37; Deubiquitinase that antagonizes the anaphase-promoting complex (APC/C) during G1/S transition by mediating deubiquitination of APC/C target proteins, thereby promoting S phase entry. Specifically mediates deubiquitination of 'Lys-11'-linked polyubiquitin chains, a specific ubiquitin-linkage type mediated by the APC/C complex (By similarity); Belongs to the peptidase C19 family.
      
 0.455
flrt3
Fibronectin leucine-rich transmembrane 3.
      
 0.433
fkbp5
Peptidylprolyl isomerase.
      
 0.414
depdc7a
DEP domain-containing protein 7; Belongs to the DEPDC7 family.
 
      0.403
pald1b
Phosphatase domain-containing paladin 1b.
      
 0.401
pald1a
Paladin.
      
 0.401
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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