Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
grtp1bGrowth hormone-regulated TBC protein 1b. (349 aa)    
Predicted Functional Partners:
ankdd1a
Ankyrin repeat and death domain-containing 1A.
    
 
 0.798
sowahd
Sosondowah ankyrin repeat domain family d.
    
 
 0.798
TMEM151A
Transmembrane protein 151A.
      
 0.783
LOC101882069
Transmembrane protein 151A.
      
 0.783
tmem119b
Transmembrane protein 119b.
      
 0.780
zgc:162941
Lysozyme g.
      
 0.780
samd10b
Sterile alpha motif domain-containing 10b.
      
 0.780
RASSF4
Ras association domain family member 4.
      
 0.780
ccdc135
Coiled-coil domain-containing 135.
    
 
 0.773
Q1L949_DANRE
Si:ch211-250g4.3.
    
 
 0.764
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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