STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim46aTripartite motif-containing 46a. (773 aa)    
Predicted Functional Partners:
mark2b
Non-specific serine/threonine protein kinase.
   
  
 0.750
trim2b
Tripartite motif-containing 2b.
      
 0.745
cxcl19
Chemokine (C-X-C motif) ligand 19.
      
 0.716
ccr10
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
   
  
 0.612
ccl19a.1
C-C motif chemokine.
      
 0.568
il12rb2
Interleukin 12 receptor beta 2.a.
      
 0.561
meis1a
Myeloid ecotropic viral integration site 4.1a.
    
 
 0.553
adarb2
Adenosine deaminase RNA-specific B2 (inactive).
   
  
 0.553
slc22a2
Solute carrier family 22 member 2.
      
 0.540
adarb1b
Adenosine deaminase RNA-specific B1b.
   
  
 0.408
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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