Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
trim46aTripartite motif-containing 46a. (773 aa)    
Predicted Functional Partners:
trim2b
Tripartite motif-containing 2b.
      
 0.759
mark2b
Non-specific serine/threonine protein kinase.
      
 0.684
usp14
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.601
ccl19a.1
C-C motif chemokine.
      
 0.594
cxcl19
Chemokine (C-X-C motif) ligand 19.
      
 0.594
ccr10
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
      
 0.564
il12rb2
Interleukin 12 receptor beta 2.a.
      
 0.563
meis1a
Myeloid ecotropic viral integration site 4.1a.
    
 
 0.561
adarb2
Adenosine deaminase RNA-specific B2 (inactive).
   
  
 0.558
slc22a2
Solute carrier family 22 member 2.
      
 0.554
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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