STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plcd1bPhosphoinositide phospholipase C. (749 aa)    
Predicted Functional Partners:
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 
 0.907
ptena
Phosphatase and tensin homolog A; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.903
pikfyve
Phosphatidylinositol phosphate 5-kinase type III isoform d.
     
 0.902
mtm1
Myotubularin 1.
     
 0.901
E7F3N0_DANRE
Si:ch211-160o17.2.
     
 0.900
pip4k2aa
Similar to type II phosphatidylinositolphosphate kinase-alpha.
   
 0.746
pip4k2ca
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma; May play an important role in the production of Phosphatidylinositol bisphosphate (PIP2).
   
 0.746
pip4k2cb
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma b.
   
 0.746
pip5k1bb
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta b.
   
 0.743
pip5k1ab
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
   
 0.742
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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