Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
crygs3Crystallin, gamma S3; Belongs to the beta/gamma-crystallin family. (183 aa)    
Predicted Functional Partners:
ca15c
Carbonic anhydrase XV c; Belongs to the alpha-carbonic anhydrase family.
      
 0.738
cryaba
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.691
impg2b
Interphotoreceptor matrix proteoglycan 2b.
      
 0.688
guca1g
Guanylate cyclase activator 1g.
      
 0.684
guca1d
Guanylate cyclase activating protein 4.
      
 0.580
slc24a2
Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.489
gjd2b
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.489
guca1b
Guanylate cyclase-activating protein 2.
   
  
 0.475
rgs9a
Regulator of G protein-signaling 9a.
      
 0.466
guca1a
Guanylate cyclase activator 1A.
   
  
 0.464
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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