Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acbd7Acyl-CoA-binding domain-containing 7. (88 aa)    
Predicted Functional Partners:
dbi
Diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).
     
  0.894
GPR45
Si:dkeyp-118h3.5.
      
 0.662
LOC100331467
START domain-containing protein.
      
 0.661
vps36
Vacuolar protein-sorting-associated protein 36; Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex.
      
 0.637
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.629
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.593
meig1
Meiosis expressed gene 1 protein homolog; Essential for spermiogenesis.
      
 0.588
acot7
Acyl-CoA thioesterase 7.
      
 0.577
btbd11b
Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B.
      
 0.571
acbd5b
Acyl-CoA-binding domain-containing protein 5-B; Binds medium- and long-chain acyl-CoA esters.
  
   
 0.569
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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