STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
g3bp2GTPase-activating protein (SH3 domain)-binding protein 2. (507 aa)    
Predicted Functional Partners:
usp10
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.949
caprin1a
Cell cycle-associated protein 1a.
   
 
 0.901
caprin1b
Cell cycle-associated protein 1b.
   
 
 0.899
cluha
Clustered mitochondria protein homolog; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria; Belongs to the CLU family.
   
 
 0.749
twist1a
Twist family bHLH transcription factor 1a.
    
 
 0.694
tia1
TIA1 cytotoxic granule-associated RNA-binding protein.
   
 
 0.672
cst14a.2
Cystatin 14a, tandem duplicate 2; Belongs to the cystatin family.
    
 
 0.655
atxn2l
Ataxin 2-like.
   
 
 0.603
ogfod1
2-oxoglutarate and iron-dependent oxygenase domain-containing 1.
   
  
 0.602
atxn2
Ataxin 2.
   
 
 0.576
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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