Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
camta1bCalmodulin-binding transcription activator 1b. (1626 aa)    
Predicted Functional Partners:
dennd4a
DENN/MADD domain-containing 4A.
   
  
 0.706
psme3ip1
Family with sequence similarity 192 member A.
    
 
 0.660
PLEKHB1
Si:ch211-176g13.7.
      
 0.590
syt9a
Synaptotagmin IXa.
   
  
 0.569
strn4
Striatin, calmodulin-binding protein 4.
   
  
 0.561
syt6a
Synaptotagmin VIa.
      
 0.560
kalrnb
Kalirin RhoGEF kinase b.
   
  
 0.559
znf704
Zinc finger protein 704; Transcription factor.
   
  
 0.551
psme3
Proteasome activator subunit 3.
    
   0.550
camk1b
Calcium/calmodulin-dependent protein kinase Ib; Belongs to the protein kinase superfamily.
   
  
 0.510
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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