STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmdsGDP-mannose 4,6 dehydratase. (370 aa)    
Predicted Functional Partners:
tsta3
Tissue-specific transplantation antigen P35B.
 
 0.996
TSTA3
Zgc:100864.
 
 0.996
gmppb
Mannose-1-phosphate guanyltransferase beta; Catalyzes the formation of GDP-mannose, an essential precursor of glycan moieties of glycoproteins and glycolipids.
  
 
 0.993
tsta3l2
Tissue-specific transplantation antigen P35B,-like 2.
 
 0.993
gmppaa
Mannose-1-phosphate guanyltransferase alpha-A; Belongs to the transferase hexapeptide repeat family.
    
 0.972
gmppab
Mannose-1-phosphate guanyltransferase alpha-B; Belongs to the transferase hexapeptide repeat family.
  
 
 0.972
fuk
Fucose kinase.
     
 0.906
fpgt
Fucose-1-phosphate guanylyltransferase.
   
 
 0.905
dpm1
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
  
 
 0.884
alg1
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
  
 
 0.876
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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