sash1a protein (Danio rerio) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

sash1a

SAM and SH3 domain-containing 1a. (1192 aa)

Predicted Functional Partners:

trmt11

0.924

ficd

0.883

btr30

0.719

SAMD5

0.706

mmrn2a

0.668

hcrt

0.608

slc22a2

0.595

sart3

0.594

ikbkb

0.529

mtrf1l

0.500

Your Current Organism:

Danio rerio

NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SAMD5	sash1a	ENSDARP00000148516	ENSDARP00000046840	Sterile alpha motif domain containing 5.	SAM and SH3 domain-containing 1a.	0.706
btr30	ficd	ENSDARP00000131276	ENSDARP00000123219	Bloodthirsty-related gene family, member 30.	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	0.686
btr30	mmrn2a	ENSDARP00000131276	ENSDARP00000119074	Bloodthirsty-related gene family, member 30.	Multimerin 2a.	0.742
btr30	sash1a	ENSDARP00000131276	ENSDARP00000046840	Bloodthirsty-related gene family, member 30.	SAM and SH3 domain-containing 1a.	0.719
btr30	trmt11	ENSDARP00000131276	ENSDARP00000093328	Bloodthirsty-related gene family, member 30.	tRNA methyltransferase 11 homolog.	0.737
ficd	btr30	ENSDARP00000123219	ENSDARP00000131276	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	Bloodthirsty-related gene family, member 30.	0.686
ficd	mmrn2a	ENSDARP00000123219	ENSDARP00000119074	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	Multimerin 2a.	0.661
ficd	sart3	ENSDARP00000123219	ENSDARP00000004923	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	Squamous cell carcinoma antigen recognized by T-cells 3; U6 snRNP-binding protein that functions as a recycling factor of the splicing machinery. Promotes the initial reassembly of U4 and U6 snRNPs following their ejection from the spliceosome during its maturation. May also function as a substrate targeting factor for deubiquitinases and mediate the deubiquitination of components of the spliceosome and histones (By similarity).	0.873
ficd	sash1a	ENSDARP00000123219	ENSDARP00000046840	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	SAM and SH3 domain-containing 1a.	0.883
ficd	slc22a2	ENSDARP00000123219	ENSDARP00000048889	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	Solute carrier family 22 member 2.	0.621
ficd	trmt11	ENSDARP00000123219	ENSDARP00000093328	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	tRNA methyltransferase 11 homolog.	0.897
hcrt	sash1a	ENSDARP00000095322	ENSDARP00000046840	Hypocretin (orexin) neuropeptide precursor.	SAM and SH3 domain-containing 1a.	0.608
ikbkb	sash1a	ENSDARP00000117685	ENSDARP00000046840	Inhibitor of nuclear factor kappa B kinase subunit beta.	SAM and SH3 domain-containing 1a.	0.529
mmrn2a	btr30	ENSDARP00000119074	ENSDARP00000131276	Multimerin 2a.	Bloodthirsty-related gene family, member 30.	0.742
mmrn2a	ficd	ENSDARP00000119074	ENSDARP00000123219	Multimerin 2a.	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	0.661
mmrn2a	sash1a	ENSDARP00000119074	ENSDARP00000046840	Multimerin 2a.	SAM and SH3 domain-containing 1a.	0.668
mmrn2a	trmt11	ENSDARP00000119074	ENSDARP00000093328	Multimerin 2a.	tRNA methyltransferase 11 homolog.	0.690
mtrf1l	sash1a	ENSDARP00000131149	ENSDARP00000046840	Mitochondrial translational release factor 1-like.	SAM and SH3 domain-containing 1a.	0.500
sart3	ficd	ENSDARP00000004923	ENSDARP00000123219	Squamous cell carcinoma antigen recognized by T-cells 3; U6 snRNP-binding protein that functions as a recycling factor of the splicing machinery. Promotes the initial reassembly of U4 and U6 snRNPs following their ejection from the spliceosome during its maturation. May also function as a substrate targeting factor for deubiquitinases and mediate the deubiquitination of components of the spliceosome and histones (By similarity).	Protein adenylyltransferase FICD; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.	0.873
sart3	sash1a	ENSDARP00000004923	ENSDARP00000046840	Squamous cell carcinoma antigen recognized by T-cells 3; U6 snRNP-binding protein that functions as a recycling factor of the splicing machinery. Promotes the initial reassembly of U4 and U6 snRNPs following their ejection from the spliceosome during its maturation. May also function as a substrate targeting factor for deubiquitinases and mediate the deubiquitination of components of the spliceosome and histones (By similarity).	SAM and SH3 domain-containing 1a.	0.594

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Fusion

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Neighborhood

© STRING Consortium 2026

Credits

Access

Info

About