Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slc4a8Anion exchange protein. (1105 aa)    
Predicted Functional Partners:
clmn
Calmin.
      
 0.799
sgf29
SAGA complex-associated factor 29.
      
 0.561
strbp
Spermatid perinuclear RNA-binding protein.
      
 0.560
slc26a4
Pendrin; Sodium-independent transporter of chloride and iodide. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
     
 0.559
ints8
Integrator complex subunit 8.
      
 0.505
loxhd1b
Lipoxygenase homology domains 1b.
      
 0.483
il1rapl2
Interleukin 1 receptor accessory protein-like 2.
   
  
 0.478
ift172
Intraflagellar transport protein 172 homolog; Required for the maintenance and formation of cilia.
      
 0.471
trip13
Pachytene checkpoint protein 2 homolog; Plays a key role in chromosome recombination and chromosome structure development during meiosis. Required at early steps in meiotic recombination that leads to non-crossovers pathways. Also needed for efficient completion of homologous synapsis by influencing crossover distribution along the chromosomes affecting both crossovers and non-crossovers pathways (By similarity).
    
 
 0.462
strc1
Stereocilin 1.
    
 
 0.459
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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