Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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nbasNeuroblastoma-amplified sequence; Involved in Golgi-to-endoplasmic reticulum (ER) retrograde transport; the function is proposed to depend on its association in the NRZ complex which is believed to play a role in SNARE assembly at the ER (By similarity). (2372 aa)    
Predicted Functional Partners:
rint1
RAD50 interactor 1.
    
 0.999
zw10
Zw10 kinetochore protein.
   
 0.998
stx18
Syntaxin-18; Syntaxin that may be involved in targeting and fusion of Golgi-derived retrograde transport vesicles with the ER. Belongs to the syntaxin family.
    
 0.998
use1
Vesicle transport protein USE1; SNARE that may be involved in targeting and fusion of Golgi- derived retrograde transport vesicles with the ER; Belongs to the USE1 family.
    
 0.991
sec22bb
Vesicle-trafficking protein SEC22b-B; SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER.
    
 
 0.978
bnip1b
BCL2-interacting protein 1b.
    
 0.976
napgb
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.964
bnip1a
BCL2-interacting protein 1a.
    
 
 0.954
vti1b
Vesicle transport through interaction with t-SNAREs homolog 1B (Yeast).
    
 
 0.939
napga
N-ethylmaleimide-sensitive factor attachment protein, gamma a.
    
 
 0.931
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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