Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
E7FFZ3_DANRESi:dkey-46g23.2. (1458 aa)    
Predicted Functional Partners:
lrrc4cb
Leucine-rich repeat-containing 4C, genome duplicate b.
    
 
 0.587
cyp7a1b
Uncharacterized protein.
   
  
 0.578
LOC562139
Similar to chymotrypsinogen B1; Belongs to the peptidase S1 family.
    
 0.524
zgc:112160
Zgc:112160; Belongs to the peptidase S1 family.
    
 0.524
lipf
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
  
 0.519
si:dkey-32n7.4
Si:dkey-32n7.4; Belongs to the integrin alpha chain family.
    
 0.502
ctrb1
Chymotrypsinogen B1; Belongs to the peptidase S1 family.
    
 0.492
sqleb
Squalene epoxidase b.
   
  
 0.457
cfi
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.440
c8b
Complement component 8, beta polypeptide.
   
  0.431
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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