STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7FFZ3_DANRESi:dkey-46g23.2. (1458 aa)    
Predicted Functional Partners:
LOC562139
Similar to chymotrypsinogen B1; Belongs to the peptidase S1 family.
    
 
 0.734
zgc:112160
Zgc:112160; Belongs to the peptidase S1 family.
    
 
 0.734
ctrb1
Chymotrypsinogen B1; Belongs to the peptidase S1 family.
    
 
 0.700
lrrc4cb
Leucine-rich repeat-containing 4C, genome duplicate b.
      
 0.624
cyp7a1b
Uncharacterized protein.
   
  
 0.567
tmprss13b
Transmembrane serine protease 13b; Belongs to the peptidase S1 family.
    
  0.557
st14a
Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix.
    
  0.557
F1QV82_DANRE
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
  0.557
ovch2
Ovochymase 2; Belongs to the peptidase S1 family.
    
  0.557
zmp:0000001114
Zmp:0000001114.
    
  0.557
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.