STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gemGTP-binding protein overexpressed in skeletal muscle. (291 aa)    
Predicted Functional Partners:
ptgdsb.2
Prostaglandin D2 synthase b, tandem duplicate 2; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.894
ptgdsb.1
Lipocalin-type prostaglandin D synthase-like protein; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.713
phlda2
Pleckstrin homology-like domain family A member 2; Plays a role in regulating placenta growth. May act via its PH domain that competes with other PH domain-containing proteins, thereby preventing their binding to membrane lipids (By similarity).
      
 0.644
npb
Neuropeptide B.
      
 0.644
itsn2a
Intersectin 2a.
    
 
 0.581
itsn2b
Intersectin 2b.
    
 
 0.581
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.551
dusp5
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
 
 0.525
im:7152348
Im:7152348.
    
 
 0.497
shank3a
SH3 and multiple ankyrin repeat domains 3a.
    
 
 0.493
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.