Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gemGTP-binding protein overexpressed in skeletal muscle. (291 aa)    
Predicted Functional Partners:
ptgdsb.2
Prostaglandin D2 synthase b, tandem duplicate 2; Belongs to the calycin superfamily. Lipocalin family.
      
 0.739
ptgdsb.1
Lipocalin-type prostaglandin D synthase-like protein; Belongs to the calycin superfamily. Lipocalin family.
    
 
 0.606
npb
Neuropeptide B.
      
 0.594
im:7152348
Im:7152348.
    
 0.591
frmpd2
FERM and PDZ domain-containing 2.
    
 0.590
phlda2
Pleckstrin homology-like domain family A member 2; Plays a role in regulating placenta growth. May act via its PH domain that competes with other PH domain-containing proteins, thereby preventing their binding to membrane lipids (By similarity).
      
 0.571
si:dkey-34e4.1
Si:dkey-34e4.1.
    
 0.500
nos1apa
Nitric oxide synthase 1 (neuronal) adaptor protein a.
    
 0.500
nos1apb
Nitric oxide synthase 1 (neuronal) adaptor protein b.
    
 0.500
dusp5
Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
   
 0.494
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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