Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slc5a11Solute carrier family 5 (Sodium/glucose cotransporter), member 11; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (668 aa)    
Predicted Functional Partners:
slc13a4
Solute carrier family 13 member 4.
  
  
 0.751
col27a1b
Collagen alpha-1(XXVII) chain B.
      
 0.688
ipo4
Importin 4.
   
  
 0.605
slc26a1
Sulfate anion transporter 1; Mediates sulfate transport with high affinity. Mediates oxalate transport. Mediates bicarbonate transport. Does not accept succinate as cosubstrate; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
   
  
 0.580
slc26a2
Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
   
  
 0.567
wipf1b
WAS/WASL-interacting protein family, member 1b.
      
 0.567
col6a4a
Collagen, type VI, alpha 4a.
      
 0.550
slc3a1
Solute carrier family 3 member 1.
   
  
 0.508
slc22a5
Solute carrier family 22 member 5.
     
 0.494
bcat1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
      
 0.471
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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