STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp2u1Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family. (533 aa)    
Predicted Functional Partners:
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
     
 0.954
cyp4f3
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.941
pla2g4ab
Phospholipase A2.
    
 0.920
cyp2p7
Cytochrome P450, family 2, subfamily J, polypeptide 24; Belongs to the cytochrome P450 family.
  
0.918
pla2g4aa
Cytosolic phospholipase A2; Selectively hydrolyzes arachidonyl phospholipids in the sn-2 position releasing arachidonic acid. Together with its lysophospholipid activity, it is implicated in the initiation of the inflammatory response.
    
 0.917
cyp2p8
Cytochrome P450, family 2, subfamily J, polypeptide 23; Belongs to the cytochrome P450 family.
  
 
0.916
pla2g3
Phospholipase A2 group III.
   
 0.915
proca1
Protein-interacting with cyclin A1.
    
 0.915
cyp2j20
Cytochrome P450, family 2, subfamily J, polypeptide 20; Belongs to the cytochrome P450 family.
  
 
 
0.915
rarres3l
Retinoic acid receptor responder 3-like.
   
 0.907
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.