Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps33Mitochondrial ribosomal protein S33. (106 aa)    
Predicted Functional Partners:
mrps31
Mitochondrial ribosomal protein S31.
   
 0.998
mrps21
Mitochondrial ribosomal protein S21.
   
 0.996
mrps18c
Mitochondrial ribosomal protein S18C.
   
 0.995
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.994
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 0.993
mrps22
Mitochondrial ribosomal protein S22.
   
 0.992
mrps14
Novel protein similar to vertebrate mitochondrial ribosomal protein S14 (MRPS14, zgc:153664).
   
 0.992
mrps24
28S ribosomal protein S24, mitochondrial; Belongs to the universal ribosomal protein uS3 family.
   
 0.992
mrps17
Mitochondrial ribosomal protein S17.
   
 0.991
MRPS12
Si:dkey-17e16.10; Belongs to the universal ribosomal protein uS12 family.
   
  0.991
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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