Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
E9QFY7_DANRESi:dkey-167k11.5. (227 aa)    
Predicted Functional Partners:
hsp90b1
Heat shock protein 90, beta (Grp94), member 1.
   
 0.630
rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10; Belongs to the universal ribosomal protein uL10 family.
    
 
 0.608
rpl3
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.574
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across t [...]
    
 
 0.574
tmed2
Transmembrane p24-trafficking protein 2.
    
 
 0.570
rpl32
Ribosomal protein L32.
    
 
 0.567
fkbp11
Peptidylprolyl isomerase.
   
 
 0.564
rpl13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
    
 
 0.562
mak
Male germ cell-associated kinase.
    
 
 0.561
zbtb20
Zinc finger and BTB domain-containing 20.
    
 0.560
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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