STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rassf2aRas association domain family member 2a. (325 aa)    
Predicted Functional Partners:
letmd1
LETM1 domain-containing 1.
      
 0.744
carnmt1
Carnosine N-methyltransferase 1.
      
 0.743
stk17b
Serine/threonine kinase 17B (Apoptosis-inducing); Belongs to the protein kinase superfamily.
   
  
 0.682
rprd1a
Regulation of nuclear pre-mRNA domain-containing 1A.
      
 0.647
ascc1
Activating signal cointegrator 1 complex subunit 1.
   
  
 0.625
sav1
Salvador family WW domain-containing protein 1.
    
 
 0.580
mxra5a
Matrix-remodelling-associated 5a.
      
 0.570
cavin2a
Caveolae-associated protein 2a.
      
 0.568
slc23a2
Solute carrier family 23 member 2.
 
    
 0.563
tmeff2a
Transmembrane protein with EGF-like and two follistatin-like domains 2a.
      
 0.557
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.