Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
anapc11 | rbx1 | ENSDARP00000130416 | ENSDARP00000055431 | APC11 anaphase-promoting complex subunit 11 homolog (yeast). | Ring-box 1, E3 ubiquitin protein ligase. | 0.732 |
anapc11 | rps27a | ENSDARP00000130416 | ENSDARP00000128775 | APC11 anaphase-promoting complex subunit 11 homolog (yeast). | Ribosomal protein S27a. | 0.612 |
anapc11 | ube2d1a | ENSDARP00000130416 | ENSDARP00000048852 | APC11 anaphase-promoting complex subunit 11 homolog (yeast). | Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. | 0.665 |
im:7152348 | rps27a | ENSDARP00000127705 | ENSDARP00000128775 | Im:7152348. | Ribosomal protein S27a. | 0.872 |
im:7152348 | uba52 | ENSDARP00000127705 | ENSDARP00000060744 | Im:7152348. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.865 |
im:7152348 | ube2d1a | ENSDARP00000127705 | ENSDARP00000048852 | Im:7152348. | Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. | 0.640 |
rbx1 | anapc11 | ENSDARP00000055431 | ENSDARP00000130416 | Ring-box 1, E3 ubiquitin protein ligase. | APC11 anaphase-promoting complex subunit 11 homolog (yeast). | 0.732 |
rbx1 | rps27a | ENSDARP00000055431 | ENSDARP00000128775 | Ring-box 1, E3 ubiquitin protein ligase. | Ribosomal protein S27a. | 0.923 |
rbx1 | uba52 | ENSDARP00000055431 | ENSDARP00000060744 | Ring-box 1, E3 ubiquitin protein ligase. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.870 |
rbx1 | ube2d1a | ENSDARP00000055431 | ENSDARP00000048852 | Ring-box 1, E3 ubiquitin protein ligase. | Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. | 0.645 |
rbx1 | ube2v2 | ENSDARP00000055431 | ENSDARP00000004795 | Ring-box 1, E3 ubiquitin protein ligase. | Ubiquitin-conjugating enzyme E2 variant 2; Has no ubiquitin ligase activity on its own. The ube2v2/ube2n heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly- ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage (By similarity); Belongs to the ubiquitin-c [...] | 0.587 |
rnf4 | rps27a | ENSDARP00000138497 | ENSDARP00000128775 | Ring finger protein 4. | Ribosomal protein S27a. | 0.807 |
rnf4 | uba52 | ENSDARP00000138497 | ENSDARP00000060744 | Ring finger protein 4. | Ubiquitin A-52 residue ribosomal protein fusion product 1. | 0.807 |
rnf4 | ube2d1a | ENSDARP00000138497 | ENSDARP00000048852 | Ring finger protein 4. | Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. | 0.604 |
rnf4 | ube2v1 | ENSDARP00000138497 | ENSDARP00000067116 | Ring finger protein 4. | Ubiquitin-conjugating enzyme E2 variant 1. | 0.610 |
rnf4 | ube2v2 | ENSDARP00000138497 | ENSDARP00000004795 | Ring finger protein 4. | Ubiquitin-conjugating enzyme E2 variant 2; Has no ubiquitin ligase activity on its own. The ube2v2/ube2n heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly- ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage (By similarity); Belongs to the ubiquitin-c [...] | 0.635 |
rps27a | anapc11 | ENSDARP00000128775 | ENSDARP00000130416 | Ribosomal protein S27a. | APC11 anaphase-promoting complex subunit 11 homolog (yeast). | 0.612 |
rps27a | im:7152348 | ENSDARP00000128775 | ENSDARP00000127705 | Ribosomal protein S27a. | Im:7152348. | 0.872 |
rps27a | rbx1 | ENSDARP00000128775 | ENSDARP00000055431 | Ribosomal protein S27a. | Ring-box 1, E3 ubiquitin protein ligase. | 0.923 |
rps27a | rnf4 | ENSDARP00000128775 | ENSDARP00000138497 | Ribosomal protein S27a. | Ring finger protein 4. | 0.807 |
page 1 of 3