STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ognbOsteoglycin, paralog b. (245 aa)    
Predicted Functional Partners:
olfml3b
Olfactomedin-like protein 3A; Secreted scaffold protein that plays an essential role in dorsoventral patterning during early development. Stabilizes axial formation by restricting chordin (CHRD) activity on the dorsal side. Acts by facilitating the association between the tolloid proteases and their substrate chordin (CHRD), leading to enhance chordin (CHRD) degradation (By similarity); Belongs to the OLFML3 family.
    
 
 0.504
zgc:171776
Zgc:171776.
   
   0.488
ENSDARP00000114321
Si:dkey-90l23.2.
   
   0.482
A8HAI9_DANRE
Si:ch211-12h2.8.
   
   0.481
zgc:153499
Zgc:153499.
   
   0.481
ENSDARP00000143901
Si:dkey-240e12.6.
   
   0.481
adgrl2b.1
Adhesion G protein-coupled receptor L2b, tandem duplicate 1.
    
   0.480
zgc:171781
Zgc:171781.
    
   0.480
F1R0Z3_DANRE
Si:dkey-179j5.5.
    
   0.480
LOC110438301
Si:ch211-226h8.6.
    
   0.480
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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