STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
villVillin-like. (850 aa)    
Predicted Functional Partners:
dmtn
Dematin actin-binding protein.
   
  
 0.646
csdc2a
Cold shock domain-containing C2, RNA-binding a.
   
  
 0.613
cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
      
 0.594
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 
 0.591
CSDC2
Cold shock domain containing C2.
   
  
 0.565
fabp2
Fatty acid-binding protein 2, intestinal; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.541
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 
 0.524
cog3
Component of oligomeric golgi complex 3.
    
 
 0.516
cog4
Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family.
    
 
 0.451
smim7
Small integral membrane protein 7.
    
 
 0.451
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.