Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
abcf1ATP-binding cassette, sub-family F (GCN20), member 1. (877 aa)    
Predicted Functional Partners:
eef1g
Elongation factor 1-gamma; Probably plays a role in anchoring the complex to other cellular components.
   
 
 0.874
abce1
ATP-binding cassette, sub-family E (OABP), member 1.
   
 
0.873
rpl18
Ribosomal protein L18.
   
 
 0.817
rps18
40S ribosomal protein S18; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA (By similarity). Plays an essential role in early embryonic development.
  
 
 0.815
tmem59
Si:dkey-181m9.10 protein.
    
 
 0.790
drg1
Developmentally-regulated GTP-binding protein 1.
   
 
 0.787
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
   
  
0.773
polr1b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.773
zgc:171772
Zgc:171772 protein.
   
 
 0.721
tcf19l
Transcription factor 19 (SC1),-like.
  
 
 0.715
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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