Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
col10a1a | ihhb | ENSDARP00000085454 | ENSDARP00000076199 | Collagen, type X, alpha 1a. | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | 0.808 |
col10a1a | pth1r | ENSDARP00000085454 | ENSDARP00000091807 | Collagen, type X, alpha 1a. | Parathyroid hormone receptor PTH1R; Belongs to the G-protein coupled receptor 2 family. | 0.432 |
col10a1a | pthlha | ENSDARP00000085454 | ENSDARP00000049153 | Collagen, type X, alpha 1a. | Parathyroid hormone-like hormone a. | 0.670 |
ihhb | col10a1a | ENSDARP00000076199 | ENSDARP00000085454 | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | Collagen, type X, alpha 1a. | 0.808 |
ihhb | pth1r | ENSDARP00000076199 | ENSDARP00000091807 | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | Parathyroid hormone receptor PTH1R; Belongs to the G-protein coupled receptor 2 family. | 0.525 |
ihhb | pth4 | ENSDARP00000076199 | ENSDARP00000144118 | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | Parathyroid hormone 4; Neuroendocrine peptide which is produced by a subset of neurons in the hypothalamus. Activates the G-protein coupled receptors pth1ra, pth1rb and pth2r with similar affinity. Receptor binding stimulates intracellular cAMP production. Plays a role in bone mineralization by regulating expression of factors involved in phosphate homeostasis. Important for embryonic bone development. | 0.400 |
ihhb | pthlha | ENSDARP00000076199 | ENSDARP00000049153 | Indian hedgehog B protein C-product; Intercellular signal essential for a variety of patterning events during development. Signal produced by the notochord that induces somite patterning and muscle pioneer differentiation. | Parathyroid hormone-like hormone a. | 0.850 |
kpnb1 | pthlha | ENSDARP00000135519 | ENSDARP00000049153 | Karyopherin (importin) beta 1. | Parathyroid hormone-like hormone a. | 0.817 |
pth1a | pth1b | ENSDARP00000118323 | ENSDARP00000118249 | Parathyroid hormone 1a. | Parathyroid hormone ligand type-2. | 0.925 |
pth1a | pth1r | ENSDARP00000118323 | ENSDARP00000091807 | Parathyroid hormone 1a. | Parathyroid hormone receptor PTH1R; Belongs to the G-protein coupled receptor 2 family. | 0.987 |
pth1a | pth2 | ENSDARP00000118323 | ENSDARP00000029759 | Parathyroid hormone 1a. | Tuberoinfundibular peptide of 39 residues; Plays a role as a potent and selective agonist of pth2r resulting in adenyl cyclase activation and intracellular calcium level elevation; Belongs to the parathyroid hormone family. | 0.980 |
pth1a | pth2ra | ENSDARP00000118323 | ENSDARP00000009332 | Parathyroid hormone 1a. | Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family. | 0.991 |
pth1a | pth3r | ENSDARP00000118323 | ENSDARP00000027674 | Parathyroid hormone 1a. | Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family. | 0.994 |
pth1a | pth4 | ENSDARP00000118323 | ENSDARP00000144118 | Parathyroid hormone 1a. | Parathyroid hormone 4; Neuroendocrine peptide which is produced by a subset of neurons in the hypothalamus. Activates the G-protein coupled receptors pth1ra, pth1rb and pth2r with similar affinity. Receptor binding stimulates intracellular cAMP production. Plays a role in bone mineralization by regulating expression of factors involved in phosphate homeostasis. Important for embryonic bone development. | 0.475 |
pth1a | pthlha | ENSDARP00000118323 | ENSDARP00000049153 | Parathyroid hormone 1a. | Parathyroid hormone-like hormone a. | 0.850 |
pth1b | pth1a | ENSDARP00000118249 | ENSDARP00000118323 | Parathyroid hormone ligand type-2. | Parathyroid hormone 1a. | 0.925 |
pth1b | pth1r | ENSDARP00000118249 | ENSDARP00000091807 | Parathyroid hormone ligand type-2. | Parathyroid hormone receptor PTH1R; Belongs to the G-protein coupled receptor 2 family. | 0.972 |
pth1b | pth2 | ENSDARP00000118249 | ENSDARP00000029759 | Parathyroid hormone ligand type-2. | Tuberoinfundibular peptide of 39 residues; Plays a role as a potent and selective agonist of pth2r resulting in adenyl cyclase activation and intracellular calcium level elevation; Belongs to the parathyroid hormone family. | 0.989 |
pth1b | pth2ra | ENSDARP00000118249 | ENSDARP00000009332 | Parathyroid hormone ligand type-2. | Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family. | 0.973 |
pth1b | pth3r | ENSDARP00000118249 | ENSDARP00000027674 | Parathyroid hormone ligand type-2. | Parathyroid hormone 1 receptor b; Belongs to the G-protein coupled receptor 2 family. | 0.985 |
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