Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
psme2Proteasome activator subunit 2. (244 aa)    
Predicted Functional Partners:
psme1
Proteasome activator subunit 1.
  
0.999
psmb9a
Proteasome subunit beta.
   
 0.996
psme3
Proteasome activator subunit 3.
  
0.996
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.994
psmb3
Proteasome subunit beta.
   
 0.991
psma5
Proteasome subunit alpha type.
   
 0.990
psmb1
Proteasome subunit beta.
   
 0.989
psma1
Proteasome subunit alpha type.
   
 0.989
psmb2
Proteasome subunit beta.
   
 0.988
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.985
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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