Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fermt2Fermitin family homolog 2; Scaffolding protein that enhances integrin activation mediated by TLN1 and/or TLN2, but activates integrins only weakly by itself. Binds to membranes enriched in phosphoinositides. Enhances integrin-mediated cell adhesion onto the extracellular matrix and cell spreading; this requires both its ability to interact with integrins and with phospholipid membranes. Required for the assembly of focal adhesions. Participates in the connection between extracellular matrix adhesion sites and the actin cytoskeleton and also in the orchestration of actin assembly and ce [...] (684 aa)    
Predicted Functional Partners:
fblim1
Filamin-binding LIM protein 1.
    
 0.983
ilk
Integrin-linked kinase.
   
 
 0.965
ENSDARP00000147407
Integrin beta.
   
 0.861
itgb7
Integrin beta; Belongs to the integrin beta chain family.
   
 0.858
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
 0.842
vclb
Vinculin b.
   
 
 0.837
vcla
Vinculin a.
   
 
 0.835
itgb1a
Integrin beta; Belongs to the integrin beta chain family.
   
 0.832
itgb2
Integrin beta.
   
 0.832
lims1
LIM domain-containing protein.
   
 
 0.822
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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