Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
crybgxCrystallin beta gamma X; Belongs to the beta/gamma-crystallin family. (207 aa)    
Predicted Functional Partners:
ccdc24
Coiled-coil domain-containing 24.
      
 0.720
opn1lw2
Red-sensitive opsin-2; Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
   
  
 0.692
cryaa
Crystallin, alpha A; Belongs to the small heat shock protein (HSP20) family.
   
  
 0.661
phka1b
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
      
 0.596
kcna6a
Potassium voltage-gated channel, shaker-related, subfamily, member 6 a; Belongs to the potassium channel family.
      
 0.594
LOC101882092
Wu:fc23c09.
      
 0.590
rp1l1b
Rp1-like 1b.
      
 0.569
arhgef15
Rho guanine nucleotide exchange factor (GEF) 15.
      
 0.564
tnfaip2b
Tumor necrosis factor, alpha-induced protein 2b.
      
 0.505
gna14
Guanine nucleotide-binding protein (G protein), alpha 14.
      
 0.504
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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