Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grifinGrifin; Binds lactose. (139 aa)    
Predicted Functional Partners:
Plekhg3
Si:ch73-212j7.3.
      
 0.901
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
   
  
 0.819
lgsn
Lengsin, lens protein with glutamine synthetase domain; Belongs to the glutamine synthetase family.
   
  
 0.805
ccdc126
Coiled-coil domain-containing 126.
      
 0.789
wdr17
WD repeat domain 17.
    
 
 0.788
ankrd33ab
Ankyrin repeat domain 33Ab.
   
 
 0.783
ankrd33aa
Ankyrin repeat domain 33Aa.
   
 
 0.783
cryba1a
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
  
 0.758
lrit2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
      
 0.734
slc16a12a
Solute carrier family 16 member 12a.
      
 0.720
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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