Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ildr2Immunoglobulin-like domain-containing receptor 2. (590 aa)    
Predicted Functional Partners:
ccser2b
Coiled-coil serine-rich protein 2b.
      
 0.828
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
      
 0.675
cx28.8
Similar to gap junction membrane channel protein beta 4.
      
 0.663
zgc:77439
Flavin-containing monooxygenase.
   
  
 0.661
LOC793236
Flavin-containing monooxygenase.
   
  
 0.661
cx34.5
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.597
pctp
Phosphatidylcholine transfer protein.
      
 0.594
tra2b
Transformer 2 beta homolog.
      
 0.585
phactr4a
Phosphatase and actin regulator 4A.
   
  
 0.573
tbc1d1
TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1.
      
 0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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