Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
trpc2bTransient receptor potential cation channel subfamily C member 2b; Belongs to the transient receptor (TC 1.A.4) family. (1139 aa)    
Predicted Functional Partners:
ompb
Olfactory marker protein b.
      
 0.885
trpa1a
Transient receptor potential cation channel, subfamily A, member 1a.
   
  
 0.773
ora4
Olfactory receptor class A-like protein 4; Probable olfactory receptor.
      
 0.739
trpv1
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.738
trpv4
Transient receptor potential cation channel, subfamily V, member 4.
      
 0.720
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
    
 
 0.714
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
0.696
sparc
Secreted protein, acidic, cysteine-rich (osteonectin).
   
  
 0.671
taar13b
Trace amine-associated receptor 13b; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.666
taar20t
Trace amine-associated receptor 20t; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.666
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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