STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcan3Regulator of calcineurin family member 3. (230 aa)    
Predicted Functional Partners:
ppp3r1a
Protein phosphatase 3, regulatory subunit B, alpha a.
    
 
 0.752
ppp3cb
Serine/threonine-protein phosphatase.
   
 
 0.673
zfyve21
Zinc finger, FYVE domain-containing 21.
   
  
 0.670
F1QFG5_DANRE
Si:dkey-177p2.6.
      
 0.669
ect2l
Coiled-coil domain-containing 28A.
      
 0.669
calm1a
Calmodulin 1a.
   
 
 0.666
calm3b
Calmodulin 3b (phosphorylase kinase, delta).
    
 
 0.666
calm3a
Calmodulin 3a (phosphorylase kinase, delta).
    
 
 0.666
pinx1
PIN2 (TERF1)-interacting telomerase inhibitor 1.
      
 0.649
ciao2b
Cytosolic iron-sulfur assembly component 2B.
      
 0.648
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.