Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
zgc:101699Zgc:101699. (554 aa)    
Predicted Functional Partners:
cyp4f3
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
     
 0.844
g6fl
G6f-like.
     
 0.827
ube2v1
Ubiquitin-conjugating enzyme E2 variant 1.
     
  0.817
E9QGC1_DANRE
Si:dkey-17e16.9.
     
 0.776
alox5b.2
Arachidonate 5-lipoxygenase b, tandem duplicate 2.
   
 
 0.772
alox5b.1
Arachidonate 5-lipoxygenase b, tandem duplicate 1.
     
 0.768
trarg1b
Trafficking regulator of GLUT4 (SLC2A4) 1b.
    
 
 0.760
pld2
Phospholipase.
   
 
 0.758
pla2g7
Platelet-activating factor acetylhydrolase.
     
 0.757
chpt1
Cholinephosphotransferase 1; Catalyzes phosphatidylcholine biosynthesis from CDP-choline. It thereby plays a central role in the formation and maintenance of vesicular membranes (By similarity).
     
 0.751
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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