Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
laynaLayilin a. (345 aa)    
Predicted Functional Partners:
eva1a
Protein eva-1 homolog A; Acts as a regulator of programmed cell death, mediating both autophagy and apoptosis; Belongs to the EVA1 family.
      
 0.799
EVA1A
Eva-1 homolog A, regulator of programmed cell death.
      
 0.799
clec3ba
C-type lectin domain family 3, member Ba.
      
 0.792
E7F569_DANRE
Si:ch211-153b23.5.
      
 0.780
nefmb
Neurofilament, medium polypeptide b; Belongs to the intermediate filament family.
    
 0.746
F1QX88_DANRE
Si:ch211-51a6.2; Belongs to the peptidase S1 family.
    
 0.725
atrn
Attractin.
      
 0.657
clec3bb
C-type lectin domain family 3, member Bb.
      
 0.600
smoc1
SPARC-related modular calcium-binding 1.
      
 0.562
es1
ES1 protein, mitochondrial; Plays a role in promoting mitochondrial enlargement in cone photoreceptor cells in a fusion-independent and ATP-dependent manner.
      
 0.517
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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