STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spns3Protein spinster homolog 3; Sphingolipid transporter; Belongs to the major facilitator superfamily. Spinster (TC 2.A.1.49) family. (498 aa)    
Predicted Functional Partners:
mfsd13a
Major facilitator superfamily domain-containing 13A.
      
 0.850
mfsd11
Major facilitator superfamily domain-containing 11.
   
  
 0.836
mfsd2b
Major facilitator superfamily domain-containing 2B.
     
 0.817
mfsd6l
Major facilitator superfamily domain-containing protein 6-like.
   
  
 0.804
mfsd9
Major facilitator superfamily domain-containing 9.
   
  
 0.792
tmem104
Transmembrane protein 104.
      
 0.761
svopl
Putative transporter SVOPL.
      
 0.759
svopa
SV2-related protein a.
      
 0.758
mfsd6a
Major facilitator superfamily domain-containing protein 6-A.
   
  
 0.747
mfsd5
Molybdate-anion transporter; Mediates high-affinity intracellular uptake of the rare oligo-element molybdenum; Belongs to the major facilitator superfamily.
      
 0.733
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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